Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 AC026202.3-201ENST00000600805 1127 ntBASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 ABHD17AP5-201ENST00000580133 923 ntBASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV8-6A0A0B4J262 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV8-6A0A0B4J262 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 RAP2CP1-202ENST00000605179 643 ntBASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 AC092667.1-201ENST00000434301 2586 ntBASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV8-6A0A0B4J262 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV8-6A0A0B4J262 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-6A0A0B4J262 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TRAV8-6A0A0B4J262 AC009831.1-201ENST00000580420 1582 ntBASIC16.52■□□□□ 0.24
TRAV8-6A0A0B4J262 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-6A0A0B4J262 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV8-6A0A0B4J262 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV8-6A0A0B4J262 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV8-6A0A0B4J262 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-6A0A0B4J262 AC137767.1-201ENST00000602918 1920 ntBASIC16.52■□□□□ 0.23
TRAV8-6A0A0B4J262 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-6A0A0B4J262 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-6A0A0B4J262 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV8-6A0A0B4J262 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV8-6A0A0B4J262 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV8-6A0A0B4J262 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 AC018755.3-202ENST00000596210 929 ntBASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV8-6A0A0B4J262 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV8-6A0A0B4J262 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms