Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-7A0A0A0MS04 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRBV6-7A0A0A0MS04 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 ECEL1P1-201ENST00000373592 1742 ntBASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV6-7A0A0A0MS04 LONRF2P2-201ENST00000439212 571 ntBASIC18.99■□□□□ 0.63
TRBV6-7A0A0A0MS04 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV6-7A0A0A0MS04 ANOS2P-203ENST00000472227 1816 ntBASIC18.99■□□□□ 0.63
TRBV6-7A0A0A0MS04 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV6-7A0A0A0MS04 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 GUSBP5-202ENST00000510805 1989 ntBASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.98■□□□□ 0.63
TRBV6-7A0A0A0MS04 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRBV6-7A0A0A0MS04 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV6-7A0A0A0MS04 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 AC092068.2-201ENST00000590491 1708 ntBASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 RARRES2P2-201ENST00000394842 485 ntBASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 AL022069.1-201ENST00000568025 1636 ntBASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRBV6-7A0A0A0MS04 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 DUSP8P3-201ENST00000399571 1760 ntBASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 AC007375.3-201ENST00000600936 2314 ntBASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV6-7A0A0A0MS04 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 AC011551.1-201ENST00000614101 683 ntBASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 U85056.1-201ENST00000616429 682 ntBASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms