Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGKV2-28A0A075B6P5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 REST-210ENST00000638187 1334 ntTSL 5 BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 AC025884.2-201ENST00000553429 711 ntBASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.96□□□□□ -0.01
IGKV2-28A0A075B6P5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IGKV2-28A0A075B6P5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
IGKV2-28A0A075B6P5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
IGKV2-28A0A075B6P5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
IGKV2-28A0A075B6P5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 FOXO3B-201ENST00000395675 1928 ntBASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
IGKV2-28A0A075B6P5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IGKV2-28A0A075B6P5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
IGKV2-28A0A075B6P5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGKV2-28A0A075B6P5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
IGKV2-28A0A075B6P5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IGKV2-28A0A075B6P5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IGKV2-28A0A075B6P5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC14.93□□□□□ -0.02
IGKV2-28A0A075B6P5 AC022413.1-201ENST00000624602 984 ntBASIC14.93□□□□□ -0.02
IGKV2-28A0A075B6P5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
IGKV2-28A0A075B6P5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
IGKV2-28A0A075B6P5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
IGKV2-28A0A075B6P5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
IGKV2-28A0A075B6P5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGKV2-28A0A075B6P5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
IGKV2-28A0A075B6P5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms