Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM17Q9Y577 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 AC098657.1-201ENST00000416270 1135 ntBASIC16.21■□□□□ 0.19
TRIM17Q9Y577 FAM197Y6-201ENST00000420524 766 ntBASIC16.21■□□□□ 0.19
TRIM17Q9Y577 PPP1R2P4-201ENST00000424051 595 ntBASIC16.21■□□□□ 0.19
TRIM17Q9Y577 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 RN7SL128P-201ENST00000467883 305 ntBASIC16.21■□□□□ 0.19
TRIM17Q9Y577 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 AC087203.1-201ENST00000532111 1181 ntBASIC16.21■□□□□ 0.19
TRIM17Q9Y577 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 AL132994.1-201ENST00000554098 400 ntBASIC16.21■□□□□ 0.19
TRIM17Q9Y577 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 AL009176.1-201ENST00000607876 650 ntBASIC16.21■□□□□ 0.19
TRIM17Q9Y577 AC091769.1-201ENST00000619576 568 ntBASIC16.21■□□□□ 0.19
TRIM17Q9Y577 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRIM17Q9Y577 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM17Q9Y577 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM17Q9Y577 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRIM17Q9Y577 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AC132872.4-202ENST00000622924 2756 ntBASIC16.2■□□□□ 0.18
TRIM17Q9Y577 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AL137244.1-201ENST00000422931 865 ntBASIC16.2■□□□□ 0.18
TRIM17Q9Y577 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.2■□□□□ 0.18
TRIM17Q9Y577 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AC113347.2-201ENST00000512350 279 ntBASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AC100858.1-201ENST00000514059 1228 ntBASIC16.2■□□□□ 0.18
TRIM17Q9Y577 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AC120498.7-201ENST00000562876 330 ntBASIC16.2■□□□□ 0.18
TRIM17Q9Y577 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AL357143.1-203ENST00000639750 881 ntBASIC16.2■□□□□ 0.18
TRIM17Q9Y577 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 TCAF2P1-201ENST00000291129 2421 ntBASIC16.2■□□□□ 0.18
TRIM17Q9Y577 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TRIM17Q9Y577 AC138761.6-201ENST00000583997 1423 ntBASIC16.19■□□□□ 0.18
TRIM17Q9Y577 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM17Q9Y577 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM17Q9Y577 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM17Q9Y577 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM17Q9Y577 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM17Q9Y577 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms