Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 AC007952.4-201ENST00000573866 637 ntBASIC16.64■□□□□ 0.25
PNMA3Q9UL41 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 AC073592.2-201ENST00000623062 780 ntBASIC16.64■□□□□ 0.25
PNMA3Q9UL41 AC009145.4-201ENST00000625119 1294 ntBASIC16.64■□□□□ 0.25
PNMA3Q9UL41 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 PPT1-215ENST00000641471 2368 ntBASIC16.64■□□□□ 0.25
PNMA3Q9UL41 ACE3P-201ENST00000423435 1973 ntBASIC16.64■□□□□ 0.25
PNMA3Q9UL41 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.63■□□□□ 0.25
PNMA3Q9UL41 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 OR8T1P-201ENST00000421347 918 ntBASIC16.63■□□□□ 0.25
PNMA3Q9UL41 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.63■□□□□ 0.25
PNMA3Q9UL41 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 RN7SL357P-201ENST00000581065 298 ntBASIC16.63■□□□□ 0.25
PNMA3Q9UL41 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 BNIP3P41-202ENST00000616656 861 ntBASIC16.63■□□□□ 0.25
PNMA3Q9UL41 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PNMA3Q9UL41 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 LAP3P2-201ENST00000454686 1454 ntBASIC16.62■□□□□ 0.25
PNMA3Q9UL41 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 BRD7P5-201ENST00000299197 1822 ntBASIC16.62■□□□□ 0.25
PNMA3Q9UL41 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 PYY2-201ENST00000315776 282 ntBASIC16.62■□□□□ 0.25
PNMA3Q9UL41 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 RN7SL121P-201ENST00000584223 273 ntBASIC16.62■□□□□ 0.25
PNMA3Q9UL41 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 AC026790.2-201ENST00000606282 430 ntBASIC16.62■□□□□ 0.25
PNMA3Q9UL41 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PNMA3Q9UL41 AL009178.2-201ENST00000597278 2719 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms