Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 MYADML-201ENST00000474610 2147 ntBASIC13.68□□□□□ -0.22
CTSFQ9UBX1 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AC022447.6-201ENST00000515522 438 ntBASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AC134698.3-201ENST00000523880 214 ntBASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AC015967.2-201ENST00000624092 234 ntBASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AC006435.4-201ENST00000625037 234 ntBASIC13.68□□□□□ -0.22
CTSFQ9UBX1 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AL356737.1-201ENST00000634391 234 ntBASIC13.68□□□□□ -0.22
CTSFQ9UBX1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AGGF1P1-201ENST00000509500 2073 ntBASIC13.68□□□□□ -0.22
CTSFQ9UBX1 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSFQ9UBX1 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 KRT8P19-201ENST00000551916 1455 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AHCYP4-201ENST00000419201 1315 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AC007191.1-201ENST00000623179 2995 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 RTN3P1-201ENST00000536295 711 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 PGAM1P5-201ENST00000548011 764 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AC124068.2-201ENST00000569473 1109 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms