Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HMG20BQ9P0W2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20BQ9P0W2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20BQ9P0W2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.61■□□□□ 0.41
HMG20BQ9P0W2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20BQ9P0W2 RN7SL832P-201ENST00000607781 1756 ntBASIC17.61■□□□□ 0.41
HMG20BQ9P0W2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMG20BQ9P0W2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 AL161932.2-201ENST00000435436 679 ntBASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 AC079328.1-201ENST00000560358 952 ntBASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 AC016629.1-201ENST00000596579 586 ntBASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 AL109837.1-201ENST00000603272 613 ntBASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 FRMPD2B-201ENST00000431305 1347 ntBASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 AP002353.1-201ENST00000528257 1599 ntBASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMG20BQ9P0W2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 RNA5SP359-201ENST00000364838 113 ntBASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 POU5F1P2-201ENST00000521750 823 ntBASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 AC005586.2-201ENST00000563946 837 ntBASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 AC012044.1-201ENST00000603431 297 ntBASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMG20BQ9P0W2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms