Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 AC087499.6-201ENST00000411576 835 ntBASIC14.33□□□□□ -0.12
MKS1Q9NXB0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 CICP12-201ENST00000455801 843 ntBASIC14.33□□□□□ -0.12
MKS1Q9NXB0 KRT18P15-201ENST00000458108 1291 ntBASIC14.33□□□□□ -0.12
MKS1Q9NXB0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 AC002472.3-201ENST00000640124 621 ntBASIC14.33□□□□□ -0.12
MKS1Q9NXB0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MKS1Q9NXB0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 AP003171.2-201ENST00000528208 925 ntBASIC14.32□□□□□ -0.12
MKS1Q9NXB0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 AC093512.1-201ENST00000617969 520 ntBASIC14.32□□□□□ -0.12
MKS1Q9NXB0 CR392039.2-201ENST00000623182 509 ntBASIC14.32□□□□□ -0.12
MKS1Q9NXB0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 MSTO2P-201ENST00000314835 1709 ntBASIC14.32□□□□□ -0.12
MKS1Q9NXB0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MKS1Q9NXB0 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms