Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 AL512638.1-201ENST00000457493 794 ntBASIC12.54□□□□□ -0.4
NICN1Q9BSH3 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 AC020910.5-201ENST00000623668 1865 ntBASIC12.54□□□□□ -0.4
NICN1Q9BSH3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 AC072061.1-201ENST00000569710 2234 ntBASIC12.54□□□□□ -0.4
NICN1Q9BSH3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 KHSRPP1-201ENST00000427983 1768 ntBASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AC139712.1-201ENST00000378256 1875 ntBASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 ACTBP8-201ENST00000403258 1108 ntBASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AC103988.2-201ENST00000561804 725 ntBASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AC093512.1-201ENST00000617969 520 ntBASIC12.53□□□□□ -0.4
NICN1Q9BSH3 AC005252.2-201ENST00000624630 1141 ntBASIC12.53□□□□□ -0.4
NICN1Q9BSH3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NICN1Q9BSH3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 AL365181.3-201ENST00000605886 3222 ntBASIC12.52□□□□□ -0.4
NICN1Q9BSH3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NICN1Q9BSH3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms