Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 AC018442.1-201ENST00000421439 2061 ntBASIC16.88■□□□□ 0.29
SLF1Q9BQI6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 AC015688.4-201ENST00000580780 1647 ntBASIC16.88■□□□□ 0.29
SLF1Q9BQI6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 FAM90A2P-201ENST00000511144 1395 ntBASIC16.88■□□□□ 0.29
SLF1Q9BQI6 FAM90A25P-201ENST00000528404 1395 ntBASIC16.88■□□□□ 0.29
SLF1Q9BQI6 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 AC015909.3-201ENST00000572855 1794 ntBASIC16.87■□□□□ 0.29
SLF1Q9BQI6 MIR600HG-201ENST00000449175 5984 ntBASIC16.87■□□□□ 0.29
SLF1Q9BQI6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 AC026320.2-201ENST00000434379 478 ntBASIC16.87■□□□□ 0.29
SLF1Q9BQI6 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 RN7SL67P-201ENST00000492147 296 ntBASIC16.87■□□□□ 0.29
SLF1Q9BQI6 AC008723.1-201ENST00000506922 207 ntBASIC16.87■□□□□ 0.29
SLF1Q9BQI6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 AC006480.2-201ENST00000609770 1337 ntBASIC16.87■□□□□ 0.29
SLF1Q9BQI6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF1Q9BQI6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 MPRIPP1-201ENST00000452433 1089 ntBASIC16.86■□□□□ 0.29
SLF1Q9BQI6 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 PGAM1P5-201ENST00000548011 764 ntBASIC16.86■□□□□ 0.29
SLF1Q9BQI6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 SPCS2P2-201ENST00000603270 608 ntBASIC16.86■□□□□ 0.29
SLF1Q9BQI6 LINC01783-202ENST00000614408 828 ntBASIC16.86■□□□□ 0.29
SLF1Q9BQI6 BX284668.2-205ENST00000619677 828 ntBASIC16.86■□□□□ 0.29
SLF1Q9BQI6 AC007718.1-201ENST00000621078 280 ntBASIC16.86■□□□□ 0.29
SLF1Q9BQI6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF1Q9BQI6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms