Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC10.67□□□□□ -0.7
MUC4Q99102 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 RN7SKP175-201ENST00000408472 289 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC10.67□□□□□ -0.7
MUC4Q99102 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC10.67□□□□□ -0.7
MUC4Q99102 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC10.67□□□□□ -0.7
MUC4Q99102 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 FTH1P14-201ENST00000482930 551 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 MESTP3-201ENST00000503460 968 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
MUC4Q99102 TDH-203ENST00000531764 1110 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 AC106820.3-201ENST00000561653 397 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
MUC4Q99102 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC10.67□□□□□ -0.7
MUC4Q99102 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 AC015967.2-201ENST00000624092 234 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 AC006435.4-201ENST00000625037 234 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 AL356737.1-201ENST00000634391 234 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 ABBA01031660.1-201ENST00000635219 756 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
MUC4Q99102 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 AC134312.5-201ENST00000568031 1313 ntBASIC10.67□□□□□ -0.7
MUC4Q99102 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.67□□□□□ -0.7
MUC4Q99102 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
MUC4Q99102 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
MUC4Q99102 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC10.66□□□□□ -0.7
MUC4Q99102 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC10.66□□□□□ -0.7
MUC4Q99102 PTENP1-202ENST00000532280 3996 ntBASIC10.66□□□□□ -0.7
MUC4Q99102 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.66□□□□□ -0.7
MUC4Q99102 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
MUC4Q99102 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
MUC4Q99102 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC10.66□□□□□ -0.7
MUC4Q99102 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
MUC4Q99102 AC145423.3-201ENST00000615987 467 ntBASIC10.66□□□□□ -0.7
MUC4Q99102 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
MUC4Q99102 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
MUC4Q99102 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
MUC4Q99102 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
MUC4Q99102 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
MUC4Q99102 AC131212.3-201ENST00000624087 4219 ntBASIC10.66□□□□□ -0.7
MUC4Q99102 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
MUC4Q99102 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
MUC4Q99102 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms