Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 MIR181D-201ENST00000384853 137 ntBASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 KLF17P1-201ENST00000547105 1126 ntBASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 CDC37P2-201ENST00000562287 1029 ntBASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 RN7SL556P-201ENST00000582856 298 ntBASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 AC132812.1-201ENST00000583145 892 ntBASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 ASS1P2-201ENST00000439895 1223 ntBASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 AC093106.1-201ENST00000437271 352 ntBASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 AL136982.5-201ENST00000605222 294 ntBASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 AL590556.2-202ENST00000636906 844 ntBASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 AL365181.1-201ENST00000564032 1828 ntBASIC12.02□□□□□ -0.48
CSMD1Q96PZ7 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AC022080.1-201ENST00000366255 781 ntBASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 FAM86JP-202ENST00000484500 988 ntBASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AC022001.3-201ENST00000606330 596 ntBASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AJ011931.1-201ENST00000618749 2492 ntBASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 FAM226B-201ENST00000602508 1490 ntBASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CSMD1Q96PZ7 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms