Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AC055876.3-201ENST00000431496 288 ntBASIC12.97□□□□□ -0.33
RFT1Q96AA3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AL353779.1-201ENST00000434793 351 ntBASIC12.97□□□□□ -0.33
RFT1Q96AA3 AC004890.2-204ENST00000481968 304 ntBASIC12.97□□□□□ -0.33
RFT1Q96AA3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 AC138649.4-201ENST00000612222 287 ntBASIC12.97□□□□□ -0.33
RFT1Q96AA3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RFT1Q96AA3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RFT1Q96AA3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.96□□□□□ -0.33
RFT1Q96AA3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.96□□□□□ -0.33
RFT1Q96AA3 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.96□□□□□ -0.33
RFT1Q96AA3 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.96□□□□□ -0.33
RFT1Q96AA3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RFT1Q96AA3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.96□□□□□ -0.33
RFT1Q96AA3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.96□□□□□ -0.34
RFT1Q96AA3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
RFT1Q96AA3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
RFT1Q96AA3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.96□□□□□ -0.34
RFT1Q96AA3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RFT1Q96AA3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
RFT1Q96AA3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.95□□□□□ -0.34
RFT1Q96AA3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms