Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DDX1Q92499 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DDX1Q92499 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
DDX1Q92499 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.43■□□□□ 0.06
DDX1Q92499 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.43■□□□□ 0.06
DDX1Q92499 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.43■□□□□ 0.06
DDX1Q92499 MTX1P1-201ENST00000440904 838 ntBASIC15.43■□□□□ 0.06
DDX1Q92499 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.43■□□□□ 0.06
DDX1Q92499 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
DDX1Q92499 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.43■□□□□ 0.06
DDX1Q92499 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.43■□□□□ 0.06
DDX1Q92499 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.43■□□□□ 0.06
DDX1Q92499 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DDX1Q92499 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.43■□□□□ 0.06
DDX1Q92499 AC104982.3-201ENST00000581995 514 ntBASIC15.43■□□□□ 0.06
DDX1Q92499 AC005695.3-201ENST00000614522 232 ntBASIC15.43■□□□□ 0.06
DDX1Q92499 AC091812.3-201ENST00000621362 345 ntBASIC15.43■□□□□ 0.06
DDX1Q92499 CYP4F23P-201ENST00000593402 1579 ntBASIC15.43■□□□□ 0.06
DDX1Q92499 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.43■□□□□ 0.06
DDX1Q92499 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.43■□□□□ 0.06
DDX1Q92499 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DDX1Q92499 AC023794.5-201ENST00000564380 2157 ntBASIC15.43■□□□□ 0.06
DDX1Q92499 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DDX1Q92499 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
DDX1Q92499 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.43■□□□□ 0.06
DDX1Q92499 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
DDX1Q92499 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
DDX1Q92499 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DDX1Q92499 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DDX1Q92499 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.43■□□□□ 0.06
DDX1Q92499 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.43■□□□□ 0.06
DDX1Q92499 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.42■□□□□ 0.06
DDX1Q92499 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.42■□□□□ 0.06
DDX1Q92499 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.42■□□□□ 0.06
DDX1Q92499 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
DDX1Q92499 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 AGAP10P-201ENST00000454844 2418 ntBASIC15.42■□□□□ 0.06
DDX1Q92499 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.42■□□□□ 0.06
DDX1Q92499 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
DDX1Q92499 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 MIR769-201ENST00000390225 118 ntBASIC15.42■□□□□ 0.06
DDX1Q92499 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.42■□□□□ 0.06
DDX1Q92499 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 RPL17P11-201ENST00000417593 544 ntBASIC15.42■□□□□ 0.06
DDX1Q92499 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.42■□□□□ 0.06
DDX1Q92499 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.42■□□□□ 0.06
DDX1Q92499 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.42■□□□□ 0.06
DDX1Q92499 AC245884.6-201ENST00000515672 1067 ntBASIC15.42■□□□□ 0.06
DDX1Q92499 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
DDX1Q92499 AL160314.3-201ENST00000556041 767 ntBASIC15.42■□□□□ 0.06
DDX1Q92499 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
DDX1Q92499 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.42■□□□□ 0.06
DDX1Q92499 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
DDX1Q92499 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
DDX1Q92499 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
DDX1Q92499 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
DDX1Q92499 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.42■□□□□ 0.06
DDX1Q92499 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
DDX1Q92499 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DDX1Q92499 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.41■□□□□ 0.06
DDX1Q92499 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.41■□□□□ 0.06
DDX1Q92499 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.41■□□□□ 0.06
DDX1Q92499 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.41■□□□□ 0.06
DDX1Q92499 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.41■□□□□ 0.06
DDX1Q92499 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.41■□□□□ 0.06
DDX1Q92499 HSPB1P2-201ENST00000448722 546 ntBASIC15.41■□□□□ 0.06
DDX1Q92499 RN7SL720P-201ENST00000488178 304 ntBASIC15.41■□□□□ 0.06
DDX1Q92499 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.41■□□□□ 0.06
DDX1Q92499 AC003686.1-201ENST00000550956 1034 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms