Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 ACKR1-201ENST00000368121 1240 ntBASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 KLF2P2-201ENST00000416807 1039 ntBASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 KRT18P25-201ENST00000508931 1278 ntBASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RTN4IP1Q8WWV3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AP006294.1-201ENST00000415407 339 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC004945.1-201ENST00000416738 983 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC022616.1-201ENST00000518688 554 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC009486.1-201ENST00000569860 813 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 CLUHP6-201ENST00000580789 941 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
RTN4IP1Q8WWV3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms