Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FAM90A7P-201ENST00000382628 1395 ntBASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 FAM90A23P-201ENST00000400136 1395 ntBASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 FNTAP2-201ENST00000430308 634 ntBASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 XBP1P1-201ENST00000436573 652 ntBASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 AC004898.1-201ENST00000451057 766 ntBASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 HIST2H2BC-201ENST00000498492 580 ntBASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 AC106794.1-201ENST00000506935 792 ntBASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 PGAM1P5-201ENST00000548011 764 ntBASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 BAP1-211ENST00000615113 489 ntBASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 CCT8L1P-201ENST00000465400 1674 ntBASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 LINC02486-201ENST00000604157 3000 ntBASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHROOM3Q8TF72 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 LAP3P2-201ENST00000454686 1454 ntBASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 RNA5SP359-201ENST00000364838 113 ntBASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 AC245884.6-201ENST00000515672 1067 ntBASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 AC104506.1-201ENST00000609247 429 ntBASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 AL136295.7-201ENST00000619226 1200 ntBASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 AL162426.1-201ENST00000624141 743 ntBASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHROOM3Q8TF72 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms