Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
ALMS1Q8TCU4 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AC015818.3-201ENST00000583797 589 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 MIR8071-1-201ENST00000616769 65 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 MIR8071-2-201ENST00000616772 65 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 SIGLEC20P-201ENST00000595243 1311 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 PTN-202ENST00000393083 1599 ntTSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AL359092.2-201ENST00000423330 585 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 RNF7-205ENST00000480908 782 ntTSL 4 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AC123912.6-201ENST00000612657 315 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AC002350.2-201ENST00000623894 1828 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 HSD3BP1-201ENST00000286193 1111 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 PGK1P2-201ENST00000431702 1214 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 DUX4L31-201ENST00000446466 1136 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AC005011.1-201ENST00000455206 210 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AC103724.2-201ENST00000520355 476 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ABCD1P3-201ENST00000562927 605 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AL031768.1-201ENST00000606542 701 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AL137028.2-201ENST00000614601 256 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 MIEF1-215ENST00000637854 213 ntBASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC9.38□□□□□ -0.91
ALMS1Q8TCU4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AL139158.3-201ENST00000641212 1562 ntBASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AC215219.1-201ENST00000400706 1817 ntBASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC9.37□□□□□ -0.91
ALMS1Q8TCU4 AC023051.2-201ENST00000541141 460 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms