Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AC106794.1-201ENST00000506935 792 ntBASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AC022748.3-201ENST00000621828 275 ntBASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 AC089987.1-201ENST00000551654 2209 ntBASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 COL6A4P2-202ENST00000504443 2753 ntBASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLDND2Q8NHS1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 SHC1P1-201ENST00000425230 1745 ntBASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AL138725.1-201ENST00000407347 1314 ntBASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 RN7SKP230-201ENST00000365642 335 ntBASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AL662890.1-201ENST00000396818 632 ntBASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 TUBB8P8-201ENST00000458717 1058 ntBASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 BNIP3P13-201ENST00000599968 566 ntBASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.42□□□□□ -0.42
CLDND2Q8NHS1 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms