Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 AC069218.1-201ENST00000435269 762 ntBASIC15.83■□□□□ 0.12
VPS52Q8N1B4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 AC073150.1-201ENST00000450406 1084 ntBASIC15.83■□□□□ 0.12
VPS52Q8N1B4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 CEP164P1-201ENST00000455142 418 ntBASIC15.83■□□□□ 0.12
VPS52Q8N1B4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 MIR6720-201ENST00000611664 98 ntBASIC15.83■□□□□ 0.12
VPS52Q8N1B4 Z98259.2-201ENST00000641583 609 ntBASIC15.83■□□□□ 0.12
VPS52Q8N1B4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 AC136759.1-202ENST00000530858 2194 ntBASIC15.83■□□□□ 0.12
VPS52Q8N1B4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VPS52Q8N1B4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.82■□□□□ 0.12
VPS52Q8N1B4 AC232323.1-201ENST00000540724 2099 ntBASIC15.82■□□□□ 0.12
VPS52Q8N1B4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 AP000845.1-201ENST00000581677 2131 ntBASIC15.82■□□□□ 0.12
VPS52Q8N1B4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 TLE1P1-201ENST00000422965 589 ntBASIC15.82■□□□□ 0.12
VPS52Q8N1B4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 AC242376.1-201ENST00000559033 726 ntBASIC15.82■□□□□ 0.12
VPS52Q8N1B4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 AC006453.1-201ENST00000636037 1257 ntBASIC15.82■□□□□ 0.12
VPS52Q8N1B4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VPS52Q8N1B4 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS52Q8N1B4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VPS52Q8N1B4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms