Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 MIR1202-201ENST00000408529 83 ntBASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 AC005586.2-201ENST00000563946 837 ntBASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 AC027601.3-201ENST00000622907 509 ntBASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC83Q8IWF9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC83Q8IWF9 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC83Q8IWF9 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
CCDC83Q8IWF9 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC83Q8IWF9 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CCDC83Q8IWF9 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC83Q8IWF9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC83Q8IWF9 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CCDC83Q8IWF9 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 AL136309.1-201ENST00000403917 691 ntBASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC83Q8IWF9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms