Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 CNN2P10-201ENST00000443067 918 ntBASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 HIST2H2BB-201ENST00000449108 381 ntBASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 HOMER2P2-201ENST00000451621 847 ntBASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 CICP4-201ENST00000447359 2812 ntBASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKL3Q8IVW4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 DMBT1P1-203ENST00000636837 4628 ntBASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 RPL7P3-201ENST00000441388 714 ntBASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDKL3Q8IVW4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms