Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 USP17L6P-201ENST00000382470 1197 ntBASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 FAM58BP-201ENST00000439056 645 ntBASIC13.17□□□□□ -0.3
ATG4DQ86TL0 KLF2P1-201ENST00000447438 1042 ntBASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AC091271.1-201ENST00000611877 1162 ntBASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AL162426.1-201ENST00000624141 743 ntBASIC13.17□□□□□ -0.3
ATG4DQ86TL0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.17□□□□□ -0.3
ATG4DQ86TL0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AL354877.1-201ENST00000424412 413 ntBASIC13.16□□□□□ -0.3
ATG4DQ86TL0 ST13P19-201ENST00000442505 1124 ntBASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.16□□□□□ -0.3
ATG4DQ86TL0 FAM8A2P-201ENST00000528813 1142 ntBASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AC100827.2-201ENST00000563214 1194 ntBASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.16□□□□□ -0.3
ATG4DQ86TL0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ATG4DQ86TL0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATG4DQ86TL0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms