Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 AL022313.4-201ENST00000562756 2046 ntBASIC13.73□□□□□ -0.21
LPCAT4Q643R3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 AC104758.3-203ENST00000562938 2123 ntBASIC13.72□□□□□ -0.21
LPCAT4Q643R3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 YBX2P1-201ENST00000394192 760 ntBASIC13.72□□□□□ -0.21
LPCAT4Q643R3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 RPL13AP23-201ENST00000480739 586 ntBASIC13.72□□□□□ -0.21
LPCAT4Q643R3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 SORD2P-201ENST00000558556 1069 ntBASIC13.72□□□□□ -0.21
LPCAT4Q643R3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.72□□□□□ -0.21
LPCAT4Q643R3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.71□□□□□ -0.21
LPCAT4Q643R3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.71□□□□□ -0.21
LPCAT4Q643R3 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 TIMM8BP1-201ENST00000452384 211 ntBASIC13.71□□□□□ -0.21
LPCAT4Q643R3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 GAPDHP40-201ENST00000505218 1006 ntBASIC13.71□□□□□ -0.21
LPCAT4Q643R3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 KRT126P-201ENST00000549467 1181 ntBASIC13.71□□□□□ -0.21
LPCAT4Q643R3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 AL079307.3-201ENST00000556114 283 ntBASIC13.71□□□□□ -0.21
LPCAT4Q643R3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.71□□□□□ -0.21
LPCAT4Q643R3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
LPCAT4Q643R3 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.71□□□□□ -0.22
LPCAT4Q643R3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms