Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AP000347.1-202ENST00000435868 847 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AC023310.3-201ENST00000557027 670 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AC100756.1-201ENST00000562736 682 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 RRP7BP-205ENST00000566851 833 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AC138749.3-201ENST00000567691 622 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AC008738.7-201ENST00000609744 511 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AC116165.1-201ENST00000611806 668 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AP005019.2-201ENST00000615104 511 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AL022313.4-201ENST00000562756 2046 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 Z82170.1-201ENST00000625081 3192 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 STK40-201ENST00000359297 4837 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 ACTBP8-201ENST00000403258 1108 ntBASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 MEP1AP4-201ENST00000423244 1087 ntBASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 IGHV3-42-201ENST00000520410 361 ntBASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 AC104794.3-201ENST00000566840 1248 ntBASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 AC138696.2-201ENST00000607376 223 ntBASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 BX088702.1-201ENST00000610784 235 ntBASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 AC134684.3-201ENST00000641758 218 ntBASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms