Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 NOC2LP1-201ENST00000450578 752 ntBASIC17.38■□□□□ 0.37
RFX7Q2KHR2 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 AL022334.2-201ENST00000610000 484 ntBASIC17.38■□□□□ 0.37
RFX7Q2KHR2 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 AL805961.1-201ENST00000642026 753 ntBASIC17.38■□□□□ 0.37
RFX7Q2KHR2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 KRT8P31-201ENST00000504812 1408 ntBASIC17.37■□□□□ 0.37
RFX7Q2KHR2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 RPL17P11-201ENST00000417593 544 ntBASIC17.37■□□□□ 0.37
RFX7Q2KHR2 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 RPL8P2-201ENST00000430538 502 ntBASIC17.37■□□□□ 0.37
RFX7Q2KHR2 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 AC253536.4-201ENST00000440539 267 ntBASIC17.37■□□□□ 0.37
RFX7Q2KHR2 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 MIR3147-201ENST00000577811 66 ntBASIC17.37■□□□□ 0.37
RFX7Q2KHR2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RFX7Q2KHR2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 AL928921.2-201ENST00000641325 2442 ntBASIC17.36■□□□□ 0.37
RFX7Q2KHR2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 LDHBP1-201ENST00000455730 1119 ntBASIC17.36■□□□□ 0.37
RFX7Q2KHR2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.36■□□□□ 0.37
RFX7Q2KHR2 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms