Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.03□□□□□ -0.48
SRPXP78539 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.03□□□□□ -0.48
SRPXP78539 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.03□□□□□ -0.48
SRPXP78539 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.03□□□□□ -0.48
SRPXP78539 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.03□□□□□ -0.48
SRPXP78539 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.03□□□□□ -0.48
SRPXP78539 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.03□□□□□ -0.48
SRPXP78539 AP001002.3-201ENST00000623482 206 ntBASIC12.03□□□□□ -0.48
SRPXP78539 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SRPXP78539 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.03□□□□□ -0.48
SRPXP78539 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
SRPXP78539 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.03□□□□□ -0.48
SRPXP78539 AC004899.2-201ENST00000622993 3860 ntBASIC12.03□□□□□ -0.48
SRPXP78539 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SRPXP78539 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.03□□□□□ -0.48
SRPXP78539 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SRPXP78539 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SRPXP78539 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SRPXP78539 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRPXP78539 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRPXP78539 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.02□□□□□ -0.48
SRPXP78539 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRPXP78539 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SRPXP78539 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRPXP78539 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRPXP78539 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRPXP78539 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SRPXP78539 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.02□□□□□ -0.48
SRPXP78539 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SRPXP78539 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
SRPXP78539 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.02□□□□□ -0.49
SRPXP78539 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.02□□□□□ -0.49
SRPXP78539 KRT18P13-201ENST00000400056 1290 ntBASIC12.02□□□□□ -0.49
SRPXP78539 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
SRPXP78539 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.02□□□□□ -0.49
SRPXP78539 AC069120.2-201ENST00000524091 540 ntBASIC12.02□□□□□ -0.49
SRPXP78539 AC027369.6-201ENST00000525520 931 ntBASIC12.02□□□□□ -0.49
SRPXP78539 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.02□□□□□ -0.49
SRPXP78539 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.02□□□□□ -0.49
SRPXP78539 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.02□□□□□ -0.49
SRPXP78539 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.02□□□□□ -0.49
SRPXP78539 RARRES2P5-201ENST00000564013 466 ntBASIC12.02□□□□□ -0.49
SRPXP78539 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.02□□□□□ -0.49
SRPXP78539 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.02□□□□□ -0.49
SRPXP78539 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.02□□□□□ -0.49
SRPXP78539 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.02□□□□□ -0.49
SRPXP78539 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SRPXP78539 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
SRPXP78539 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SRPXP78539 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.01□□□□□ -0.49
SRPXP78539 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SRPXP78539 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.01□□□□□ -0.49
SRPXP78539 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRPXP78539 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRPXP78539 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SRPXP78539 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRPXP78539 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRPXP78539 AL023775.1-201ENST00000454907 1746 ntBASIC12.01□□□□□ -0.49
SRPXP78539 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRPXP78539 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SRPXP78539 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms