Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC016397.2-201ENST00000624848 1985 ntBASIC12.67□□□□□ -0.38
UBA52P62987 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 AC019294.4-201ENST00000561777 2905 ntBASIC12.67□□□□□ -0.38
UBA52P62987 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.67□□□□□ -0.38
UBA52P62987 BCRP2-202ENST00000447763 634 ntBASIC12.67□□□□□ -0.38
UBA52P62987 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 BCRP6-201ENST00000510112 632 ntBASIC12.67□□□□□ -0.38
UBA52P62987 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.67□□□□□ -0.38
UBA52P62987 BCRP7-201ENST00000511549 544 ntBASIC12.67□□□□□ -0.38
UBA52P62987 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.67□□□□□ -0.38
UBA52P62987 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.67□□□□□ -0.38
UBA52P62987 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.67□□□□□ -0.38
UBA52P62987 ENPP7P5-201ENST00000541031 1031 ntBASIC12.67□□□□□ -0.38
UBA52P62987 PTP4A1P2-201ENST00000546033 454 ntBASIC12.67□□□□□ -0.38
UBA52P62987 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.67□□□□□ -0.38
UBA52P62987 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.67□□□□□ -0.38
UBA52P62987 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.67□□□□□ -0.38
UBA52P62987 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.67□□□□□ -0.38
UBA52P62987 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 BRI3BPP1-201ENST00000594224 787 ntBASIC12.67□□□□□ -0.38
UBA52P62987 AC084346.2-201ENST00000607097 949 ntBASIC12.67□□□□□ -0.38
UBA52P62987 MIR6787-201ENST00000616675 61 ntBASIC12.67□□□□□ -0.38
UBA52P62987 MIR6869-201ENST00000619434 62 ntBASIC12.67□□□□□ -0.38
UBA52P62987 GPR182-203ENST00000622922 591 ntBASIC12.67□□□□□ -0.38
UBA52P62987 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 KRT8P37-201ENST00000451609 1420 ntBASIC12.67□□□□□ -0.38
UBA52P62987 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.67□□□□□ -0.38
UBA52P62987 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.67□□□□□ -0.38
UBA52P62987 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UBA52P62987 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 CICP11-201ENST00000434745 2827 ntBASIC12.66□□□□□ -0.38
UBA52P62987 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
UBA52P62987 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.66□□□□□ -0.38
UBA52P62987 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
UBA52P62987 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
UBA52P62987 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 AC004241.5-201ENST00000623870 2448 ntBASIC12.66□□□□□ -0.38
UBA52P62987 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.66□□□□□ -0.38
UBA52P62987 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UBA52P62987 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 AC005229.1-201ENST00000392885 409 ntBASIC12.66□□□□□ -0.38
UBA52P62987 SOCS2P1-201ENST00000417727 557 ntBASIC12.66□□□□□ -0.38
UBA52P62987 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.66□□□□□ -0.38
UBA52P62987 AC134915.1-201ENST00000426461 574 ntBASIC12.66□□□□□ -0.38
UBA52P62987 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.66□□□□□ -0.38
UBA52P62987 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.66□□□□□ -0.38
UBA52P62987 AL355864.2-201ENST00000447420 863 ntBASIC12.66□□□□□ -0.38
UBA52P62987 FO681548.1-201ENST00000455617 1132 ntBASIC12.66□□□□□ -0.38
UBA52P62987 RPL13AP25-201ENST00000484130 612 ntBASIC12.66□□□□□ -0.38
UBA52P62987 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.66□□□□□ -0.38
UBA52P62987 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 RNA5SP412-201ENST00000516234 123 ntBASIC12.66□□□□□ -0.38
UBA52P62987 AC068587.3-201ENST00000526613 355 ntBASIC12.66□□□□□ -0.38
UBA52P62987 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.66□□□□□ -0.38
UBA52P62987 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms