Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 AL645939.5-201ENST00000606834 243 ntBASIC16.69■□□□□ 0.26
CHMP4BP1P59074 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP4BP1P59074 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 KRT8P19-201ENST00000551916 1455 ntBASIC16.68■□□□□ 0.26
CHMP4BP1P59074 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 SHC1P1-201ENST00000425230 1745 ntBASIC16.68■□□□□ 0.26
CHMP4BP1P59074 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 TUBB8P8-201ENST00000458717 1058 ntBASIC16.68■□□□□ 0.26
CHMP4BP1P59074 RPL18P13-201ENST00000478088 569 ntBASIC16.68■□□□□ 0.26
CHMP4BP1P59074 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 AC008805.1-201ENST00000590892 364 ntBASIC16.68■□□□□ 0.26
CHMP4BP1P59074 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 AL162426.1-201ENST00000624141 743 ntBASIC16.68■□□□□ 0.26
CHMP4BP1P59074 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP4BP1P59074 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 AC005252.3-201ENST00000623855 2258 ntBASIC16.67■□□□□ 0.26
CHMP4BP1P59074 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 AC104457.1-201ENST00000401024 814 ntBASIC16.67■□□□□ 0.26
CHMP4BP1P59074 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP4BP1P59074 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms