Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC10.83□□□□□ -0.68
CMC4P56277 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC10.83□□□□□ -0.68
CMC4P56277 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC10.83□□□□□ -0.68
CMC4P56277 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC10.83□□□□□ -0.68
CMC4P56277 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC10.83□□□□□ -0.68
CMC4P56277 AC090386.2-201ENST00000623010 1039 ntBASIC10.83□□□□□ -0.68
CMC4P56277 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC10.83□□□□□ -0.68
CMC4P56277 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 AC068587.8-201ENST00000641239 219 ntBASIC10.83□□□□□ -0.68
CMC4P56277 NAP1L6-202ENST00000641404 1222 ntBASIC10.83□□□□□ -0.68
CMC4P56277 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.83□□□□□ -0.68
CMC4P56277 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC10.83□□□□□ -0.68
CMC4P56277 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CMC4P56277 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CMC4P56277 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC10.83□□□□□ -0.68
CMC4P56277 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC10.83□□□□□ -0.68
CMC4P56277 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.83□□□□□ -0.68
CMC4P56277 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC10.83□□□□□ -0.68
CMC4P56277 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
CMC4P56277 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC10.83□□□□□ -0.68
CMC4P56277 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC10.83□□□□□ -0.68
CMC4P56277 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC10.83□□□□□ -0.68
CMC4P56277 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CMC4P56277 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC10.83□□□□□ -0.68
CMC4P56277 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 PCDHA5-203ENST00000614258 4248 ntBASIC10.82□□□□□ -0.68
CMC4P56277 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 AC138028.6-201ENST00000616106 1482 ntBASIC10.82□□□□□ -0.68
CMC4P56277 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 FAS-202ENST00000352159 1722 ntTSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
CMC4P56277 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
CMC4P56277 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 HNRNPA1P32-201ENST00000396326 963 ntBASIC10.82□□□□□ -0.68
CMC4P56277 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 AC078875.1-201ENST00000431907 724 ntBASIC10.82□□□□□ -0.68
CMC4P56277 XBP1P1-201ENST00000436573 652 ntBASIC10.82□□□□□ -0.68
CMC4P56277 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC10.82□□□□□ -0.68
CMC4P56277 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC10.82□□□□□ -0.68
CMC4P56277 AC108725.1-201ENST00000495472 409 ntBASIC10.82□□□□□ -0.68
CMC4P56277 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC10.82□□□□□ -0.68
CMC4P56277 SCARNA20.5-201ENST00000516991 142 ntBASIC10.82□□□□□ -0.68
CMC4P56277 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC10.82□□□□□ -0.68
CMC4P56277 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 MIR3188-201ENST00000583494 85 ntBASIC10.82□□□□□ -0.68
CMC4P56277 AC103810.3-201ENST00000583567 96 ntBASIC10.82□□□□□ -0.68
CMC4P56277 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC10.82□□□□□ -0.68
CMC4P56277 AC243960.2-201ENST00000600996 747 ntBASIC10.82□□□□□ -0.68
CMC4P56277 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 AC104506.1-201ENST00000609247 429 ntBASIC10.82□□□□□ -0.68
CMC4P56277 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC10.82□□□□□ -0.68
CMC4P56277 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CMC4P56277 AC022748.3-201ENST00000621828 275 ntBASIC10.82□□□□□ -0.68
CMC4P56277 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms