Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.7□□□□□ -0.38
FOXG1P55316 IGHJ2P-201ENST00000454480 60 ntBASIC12.7□□□□□ -0.38
FOXG1P55316 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.7□□□□□ -0.38
FOXG1P55316 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.7□□□□□ -0.38
FOXG1P55316 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.7□□□□□ -0.38
FOXG1P55316 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.7□□□□□ -0.38
FOXG1P55316 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.7□□□□□ -0.38
FOXG1P55316 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 AC104506.1-201ENST00000609247 429 ntBASIC12.7□□□□□ -0.38
FOXG1P55316 AL021578.1-201ENST00000613646 709 ntBASIC12.7□□□□□ -0.38
FOXG1P55316 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.7□□□□□ -0.38
FOXG1P55316 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.7□□□□□ -0.38
FOXG1P55316 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.7□□□□□ -0.38
FOXG1P55316 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.7□□□□□ -0.38
FOXG1P55316 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
FOXG1P55316 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
FOXG1P55316 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
FOXG1P55316 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
FOXG1P55316 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
FOXG1P55316 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.7□□□□□ -0.38
FOXG1P55316 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
FOXG1P55316 AHCYP4-201ENST00000419201 1315 ntBASIC12.69□□□□□ -0.38
FOXG1P55316 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.69□□□□□ -0.38
FOXG1P55316 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.69□□□□□ -0.38
FOXG1P55316 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
FOXG1P55316 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 ISCA2P1-201ENST00000425548 448 ntBASIC12.69□□□□□ -0.38
FOXG1P55316 AC092580.1-201ENST00000433998 658 ntBASIC12.69□□□□□ -0.38
FOXG1P55316 AL596276.2-201ENST00000447525 331 ntBASIC12.69□□□□□ -0.38
FOXG1P55316 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.69□□□□□ -0.38
FOXG1P55316 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.69□□□□□ -0.38
FOXG1P55316 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
FOXG1P55316 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 MEG3_2.1-201ENST00000611456 105 ntBASIC12.69□□□□□ -0.38
FOXG1P55316 AP001505.2-201ENST00000616815 443 ntBASIC12.69□□□□□ -0.38
FOXG1P55316 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.69□□□□□ -0.38
FOXG1P55316 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.69□□□□□ -0.38
FOXG1P55316 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 AL022313.4-201ENST00000562756 2046 ntBASIC12.69□□□□□ -0.38
FOXG1P55316 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.69□□□□□ -0.38
FOXG1P55316 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
FOXG1P55316 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.69□□□□□ -0.38
FOXG1P55316 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.69□□□□□ -0.38
FOXG1P55316 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
FOXG1P55316 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FOXG1P55316 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXG1P55316 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXG1P55316 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms