Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC10.66□□□□□ -0.7
APOC4P55056 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
APOC4P55056 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC10.66□□□□□ -0.7
APOC4P55056 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
APOC4P55056 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC10.66□□□□□ -0.7
APOC4P55056 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC10.66□□□□□ -0.7
APOC4P55056 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
APOC4P55056 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
APOC4P55056 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
APOC4P55056 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
APOC4P55056 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
APOC4P55056 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
APOC4P55056 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
APOC4P55056 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC10.66□□□□□ -0.7
APOC4P55056 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.65□□□□□ -0.7
APOC4P55056 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC10.65□□□□□ -0.7
APOC4P55056 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC10.65□□□□□ -0.7
APOC4P55056 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.65□□□□□ -0.7
APOC4P55056 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.65□□□□□ -0.7
APOC4P55056 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC10.65□□□□□ -0.7
APOC4P55056 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.65□□□□□ -0.7
APOC4P55056 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC10.65□□□□□ -0.7
APOC4P55056 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
APOC4P55056 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC10.65□□□□□ -0.7
APOC4P55056 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC10.65□□□□□ -0.7
APOC4P55056 ACTG1P2-201ENST00000415776 1125 ntBASIC10.65□□□□□ -0.7
APOC4P55056 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC10.65□□□□□ -0.7
APOC4P55056 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC10.65□□□□□ -0.7
APOC4P55056 ACTG1P11-201ENST00000425411 1125 ntBASIC10.65□□□□□ -0.7
APOC4P55056 ISCA2P1-201ENST00000425548 448 ntBASIC10.65□□□□□ -0.7
APOC4P55056 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC10.65□□□□□ -0.7
APOC4P55056 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC10.65□□□□□ -0.7
APOC4P55056 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC10.65□□□□□ -0.7
APOC4P55056 NUP210P1-202ENST00000504322 710 ntBASIC10.65□□□□□ -0.7
APOC4P55056 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC10.65□□□□□ -0.7
APOC4P55056 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
APOC4P55056 PGAM1P5-201ENST00000548011 764 ntBASIC10.65□□□□□ -0.7
APOC4P55056 MIR6074-201ENST00000612054 107 ntBASIC10.65□□□□□ -0.7
APOC4P55056 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
APOC4P55056 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC10.65□□□□□ -0.7
APOC4P55056 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.65□□□□□ -0.7
APOC4P55056 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC10.65□□□□□ -0.7
APOC4P55056 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
APOC4P55056 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
APOC4P55056 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
APOC4P55056 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.65□□□□□ -0.71
APOC4P55056 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
APOC4P55056 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
APOC4P55056 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.65□□□□□ -0.71
APOC4P55056 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.71
APOC4P55056 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC10.65□□□□□ -0.71
APOC4P55056 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
APOC4P55056 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
APOC4P55056 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
APOC4P55056 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC10.65□□□□□ -0.71
APOC4P55056 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC10.65□□□□□ -0.71
APOC4P55056 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
APOC4P55056 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
APOC4P55056 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.65□□□□□ -0.71
APOC4P55056 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
APOC4P55056 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
APOC4P55056 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.65□□□□□ -0.71
APOC4P55056 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
APOC4P55056 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 AC018529.2-202ENST00000611482 3087 ntBASIC10.64□□□□□ -0.71
APOC4P55056 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
APOC4P55056 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC10.64□□□□□ -0.71
APOC4P55056 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms