Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.69□□□□□ -0.06
LIMK2P53671 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 BCYRN1-201ENST00000418539 200 ntBASIC14.69□□□□□ -0.06
LIMK2P53671 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 C2orf69P2-201ENST00000562032 1123 ntBASIC14.69□□□□□ -0.06
LIMK2P53671 MIR3615-201ENST00000581999 87 ntBASIC14.69□□□□□ -0.06
LIMK2P53671 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.69□□□□□ -0.06
LIMK2P53671 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 ENPP7P14-201ENST00000621765 1040 ntBASIC14.69□□□□□ -0.06
LIMK2P53671 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 AL354989.2-201ENST00000435838 1540 ntBASIC14.69□□□□□ -0.06
LIMK2P53671 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LIMK2P53671 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
LIMK2P53671 AC130686.1-201ENST00000622936 2466 ntBASIC14.69□□□□□ -0.06
LIMK2P53671 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.69□□□□□ -0.06
LIMK2P53671 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
LIMK2P53671 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LIMK2P53671 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
LIMK2P53671 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LIMK2P53671 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LIMK2P53671 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LIMK2P53671 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LIMK2P53671 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
LIMK2P53671 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LIMK2P53671 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.68□□□□□ -0.06
LIMK2P53671 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.68□□□□□ -0.06
LIMK2P53671 KRT8P13-201ENST00000463294 1010 ntBASIC14.68□□□□□ -0.06
LIMK2P53671 FTLP10-202ENST00000505798 471 ntBASIC14.68□□□□□ -0.06
LIMK2P53671 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.68□□□□□ -0.06
LIMK2P53671 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.68□□□□□ -0.06
LIMK2P53671 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.68□□□□□ -0.06
LIMK2P53671 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.68□□□□□ -0.06
LIMK2P53671 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.68□□□□□ -0.06
LIMK2P53671 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.68□□□□□ -0.06
LIMK2P53671 EEF1DP1-201ENST00000585891 896 ntBASIC14.68□□□□□ -0.06
LIMK2P53671 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.68□□□□□ -0.06
LIMK2P53671 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LIMK2P53671 AL022328.3-201ENST00000607943 679 ntBASIC14.68□□□□□ -0.06
LIMK2P53671 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.68□□□□□ -0.06
LIMK2P53671 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 AC023794.5-201ENST00000564380 2157 ntBASIC14.68□□□□□ -0.06
LIMK2P53671 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.68□□□□□ -0.06
LIMK2P53671 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LIMK2P53671 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LIMK2P53671 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LIMK2P53671 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LIMK2P53671 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.68□□□□□ -0.06
LIMK2P53671 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LIMK2P53671 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.67□□□□□ -0.06
LIMK2P53671 FKBP4P6-201ENST00000457486 1332 ntBASIC14.67□□□□□ -0.06
LIMK2P53671 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.67□□□□□ -0.06
LIMK2P53671 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.67□□□□□ -0.06
LIMK2P53671 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.67□□□□□ -0.06
LIMK2P53671 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.67□□□□□ -0.06
LIMK2P53671 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.67□□□□□ -0.06
LIMK2P53671 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.67□□□□□ -0.06
LIMK2P53671 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LIMK2P53671 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms