Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 KRT18P8-201ENST00000581937 1246 ntBASIC14.16□□□□□ -0.14
IDH3AP50213 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.16□□□□□ -0.14
IDH3AP50213 AC008761.3-201ENST00000624803 892 ntBASIC14.16□□□□□ -0.14
IDH3AP50213 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IDH3AP50213 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
IDH3AP50213 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IDH3AP50213 AC022144.1-201ENST00000602255 1580 ntBASIC14.16□□□□□ -0.14
IDH3AP50213 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IDH3AP50213 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.16□□□□□ -0.14
IDH3AP50213 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IDH3AP50213 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.16□□□□□ -0.14
IDH3AP50213 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.16□□□□□ -0.14
IDH3AP50213 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.16□□□□□ -0.14
IDH3AP50213 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
IDH3AP50213 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
IDH3AP50213 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.16□□□□□ -0.14
IDH3AP50213 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IDH3AP50213 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
IDH3AP50213 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
IDH3AP50213 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IDH3AP50213 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.15□□□□□ -0.14
IDH3AP50213 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.15□□□□□ -0.14
IDH3AP50213 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
IDH3AP50213 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.15□□□□□ -0.14
IDH3AP50213 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
IDH3AP50213 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.15□□□□□ -0.14
IDH3AP50213 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
IDH3AP50213 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 SPDYE19P-201ENST00000338590 713 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 AL391647.1-201ENST00000395664 511 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
IDH3AP50213 PUDPP3-201ENST00000445368 636 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.15□□□□□ -0.14
IDH3AP50213 AC004967.1-201ENST00000453589 447 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 AC004890.2-204ENST00000481968 304 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.15□□□□□ -0.14
IDH3AP50213 AC027237.1-201ENST00000560942 655 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 AC005586.2-201ENST00000563946 837 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.15□□□□□ -0.14
IDH3AP50213 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.15□□□□□ -0.14
IDH3AP50213 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.15□□□□□ -0.14
IDH3AP50213 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
IDH3AP50213 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.15□□□□□ -0.14
IDH3AP50213 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.15□□□□□ -0.14
IDH3AP50213 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.15□□□□□ -0.14
IDH3AP50213 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.15□□□□□ -0.14
IDH3AP50213 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
IDH3AP50213 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.15□□□□□ -0.14
IDH3AP50213 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
IDH3AP50213 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
IDH3AP50213 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.15□□□□□ -0.14
IDH3AP50213 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IDH3AP50213 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.15
IDH3AP50213 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
IDH3AP50213 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
IDH3AP50213 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
IDH3AP50213 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.14□□□□□ -0.15
IDH3AP50213 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.14□□□□□ -0.15
IDH3AP50213 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
IDH3AP50213 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.14□□□□□ -0.15
IDH3AP50213 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 KRT8P28-201ENST00000433288 1390 ntBASIC14.14□□□□□ -0.15
IDH3AP50213 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.14□□□□□ -0.15
IDH3AP50213 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.14□□□□□ -0.15
IDH3AP50213 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.14□□□□□ -0.15
IDH3AP50213 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IDH3AP50213 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
IDH3AP50213 SOCS2P1-201ENST00000417727 557 ntBASIC14.14□□□□□ -0.15
IDH3AP50213 MEP1AP4-201ENST00000423244 1087 ntBASIC14.14□□□□□ -0.15
IDH3AP50213 AC136604.1-202ENST00000425471 771 ntBASIC14.14□□□□□ -0.15
IDH3AP50213 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms