Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRIM23P36406 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM23P36406 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRIM23P36406 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM23P36406 AC016629.1-201ENST00000596579 586 ntBASIC14.26□□□□□ -0.13
TRIM23P36406 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM23P36406 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.26□□□□□ -0.13
TRIM23P36406 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
TRIM23P36406 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM23P36406 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 AL137784.3-201ENST00000623858 2288 ntBASIC14.26□□□□□ -0.13
TRIM23P36406 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM23P36406 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM23P36406 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM23P36406 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 LINC00552-201ENST00000625151 2579 ntBASIC14.26□□□□□ -0.13
TRIM23P36406 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRIM23P36406 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 TBC1D3J-201ENST00000620719 1426 ntBASIC14.25□□□□□ -0.13
TRIM23P36406 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 AC140479.7-201ENST00000636301 2332 ntBASIC14.25□□□□□ -0.13
TRIM23P36406 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRIM23P36406 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 RN7SL832P-201ENST00000607781 1756 ntBASIC14.25□□□□□ -0.13
TRIM23P36406 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRIM23P36406 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRIM23P36406 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRIM23P36406 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.25□□□□□ -0.13
TRIM23P36406 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 DUX4L50-201ENST00000455245 715 ntBASIC14.25□□□□□ -0.13
TRIM23P36406 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.25□□□□□ -0.13
TRIM23P36406 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.25□□□□□ -0.13
TRIM23P36406 AC093752.3-201ENST00000567343 901 ntBASIC14.25□□□□□ -0.13
TRIM23P36406 AL109837.1-201ENST00000603272 613 ntBASIC14.25□□□□□ -0.13
TRIM23P36406 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRIM23P36406 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.25□□□□□ -0.13
TRIM23P36406 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRIM23P36406 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM23P36406 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM23P36406 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.25□□□□□ -0.13
TRIM23P36406 AL161772.1-201ENST00000610494 4412 ntBASIC14.25□□□□□ -0.13
TRIM23P36406 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRIM23P36406 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRIM23P36406 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIM23P36406 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM23P36406 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIM23P36406 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRIM23P36406 AP001267.2-201ENST00000532619 2086 ntBASIC14.24□□□□□ -0.13
TRIM23P36406 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms