Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMGCLP35914 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGCLP35914 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGCLP35914 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGCLP35914 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGCLP35914 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGCLP35914 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HMGCLP35914 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGCLP35914 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.42□□□□□ -0.1
HMGCLP35914 AL451050.2-201ENST00000606967 682 ntBASIC14.42□□□□□ -0.1
HMGCLP35914 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HMGCLP35914 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMGCLP35914 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGCLP35914 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HMGCLP35914 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGCLP35914 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HMGCLP35914 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
HMGCLP35914 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
HMGCLP35914 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGCLP35914 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HMGCLP35914 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMGCLP35914 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGCLP35914 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGCLP35914 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGCLP35914 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HMGCLP35914 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGCLP35914 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HMGCLP35914 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HMGCLP35914 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 USP17L6P-201ENST00000382470 1197 ntBASIC14.41□□□□□ -0.1
HMGCLP35914 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGCLP35914 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGCLP35914 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGCLP35914 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 AC125604.1-201ENST00000496255 707 ntBASIC14.41□□□□□ -0.1
HMGCLP35914 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.41□□□□□ -0.1
HMGCLP35914 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGCLP35914 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGCLP35914 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGCLP35914 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HMGCLP35914 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGCLP35914 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGCLP35914 AC126755.1-201ENST00000525846 6405 ntBASIC14.41□□□□□ -0.1
HMGCLP35914 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HMGCLP35914 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGCLP35914 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HMGCLP35914 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGCLP35914 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
HMGCLP35914 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGCLP35914 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGCLP35914 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGCLP35914 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HMGCLP35914 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGCLP35914 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGCLP35914 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGCLP35914 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 AL928921.2-201ENST00000641325 2442 ntBASIC14.4□□□□□ -0.1
HMGCLP35914 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HMGCLP35914 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms