Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 TUBB8P4-201ENST00000511806 1324 ntBASIC19.14■□□□□ 0.65
USP6P35125 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
USP6P35125 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 MIR566-201ENST00000385187 94 ntBASIC19.14■□□□□ 0.65
USP6P35125 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6P35125 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC19.14■□□□□ 0.65
USP6P35125 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC19.14■□□□□ 0.65
USP6P35125 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6P35125 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC19.14■□□□□ 0.65
USP6P35125 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
USP6P35125 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC19.14■□□□□ 0.65
USP6P35125 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC19.14■□□□□ 0.65
USP6P35125 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC19.14■□□□□ 0.65
USP6P35125 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC19.14■□□□□ 0.65
USP6P35125 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC19.14■□□□□ 0.65
USP6P35125 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
USP6P35125 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USP6P35125 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
USP6P35125 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6P35125 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
USP6P35125 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP6P35125 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC19.13■□□□□ 0.65
USP6P35125 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC19.13■□□□□ 0.65
USP6P35125 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC19.13■□□□□ 0.65
USP6P35125 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC19.13■□□□□ 0.65
USP6P35125 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6P35125 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6P35125 CD81-209ENST00000492627 886 ntTSL 3 BASIC19.13■□□□□ 0.65
USP6P35125 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC19.13■□□□□ 0.65
USP6P35125 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 F11R-204ENST00000537746 1245 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6P35125 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6P35125 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 CES1P2-201ENST00000566467 1242 ntBASIC19.13■□□□□ 0.65
USP6P35125 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC19.13■□□□□ 0.65
USP6P35125 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC19.13■□□□□ 0.65
USP6P35125 RNF146-211ENST00000609447 607 ntTSL 4 BASIC19.13■□□□□ 0.65
USP6P35125 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.13■□□□□ 0.65
USP6P35125 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.13■□□□□ 0.65
USP6P35125 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC19.13■□□□□ 0.65
USP6P35125 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP6P35125 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
USP6P35125 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
USP6P35125 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USP6P35125 PTGER4P2-201ENST00000328411 252 ntBASIC19.12■□□□□ 0.65
USP6P35125 GEMIN8P4-201ENST00000380526 729 ntBASIC19.12■□□□□ 0.65
USP6P35125 MIR1301-201ENST00000408518 82 ntBASIC19.12■□□□□ 0.65
USP6P35125 KRT18P4-201ENST00000422599 1288 ntBASIC19.12■□□□□ 0.65
USP6P35125 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC19.12■□□□□ 0.65
USP6P35125 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 DDX39AP1-201ENST00000445147 1181 ntBASIC19.12■□□□□ 0.65
USP6P35125 PTGER4P3-201ENST00000458150 252 ntBASIC19.12■□□□□ 0.65
USP6P35125 COQ10BP2-201ENST00000513804 724 ntBASIC19.12■□□□□ 0.65
USP6P35125 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC19.12■□□□□ 0.65
USP6P35125 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC19.12■□□□□ 0.65
USP6P35125 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 CICP24-201ENST00000605464 2705 ntBASIC19.12■□□□□ 0.65
USP6P35125 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USP6P35125 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.12■□□□□ 0.65
USP6P35125 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.12■□□□□ 0.65
USP6P35125 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP6P35125 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP6P35125 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms