Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.19□□□□□ -0.14
EPHA3P29320 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
EPHA3P29320 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.19□□□□□ -0.14
EPHA3P29320 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.19□□□□□ -0.14
EPHA3P29320 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.19□□□□□ -0.14
EPHA3P29320 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.19□□□□□ -0.14
EPHA3P29320 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.19□□□□□ -0.14
EPHA3P29320 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
EPHA3P29320 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
EPHA3P29320 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
EPHA3P29320 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.19□□□□□ -0.14
EPHA3P29320 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.19□□□□□ -0.14
EPHA3P29320 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
EPHA3P29320 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.19□□□□□ -0.14
EPHA3P29320 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.19□□□□□ -0.14
EPHA3P29320 AC055876.2-201ENST00000531834 546 ntBASIC14.19□□□□□ -0.14
EPHA3P29320 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.19□□□□□ -0.14
EPHA3P29320 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
EPHA3P29320 AL691403.2-201ENST00000618460 490 ntBASIC14.19□□□□□ -0.14
EPHA3P29320 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.19□□□□□ -0.14
EPHA3P29320 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
EPHA3P29320 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.19□□□□□ -0.14
EPHA3P29320 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EPHA3P29320 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
EPHA3P29320 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.19□□□□□ -0.14
EPHA3P29320 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
EPHA3P29320 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
EPHA3P29320 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
EPHA3P29320 CLUHP2-201ENST00000426660 1303 ntBASIC14.18□□□□□ -0.14
EPHA3P29320 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
EPHA3P29320 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
EPHA3P29320 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.18□□□□□ -0.14
EPHA3P29320 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.18□□□□□ -0.14
EPHA3P29320 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.18□□□□□ -0.14
EPHA3P29320 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.18□□□□□ -0.14
EPHA3P29320 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.18□□□□□ -0.14
EPHA3P29320 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.18□□□□□ -0.14
EPHA3P29320 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.18□□□□□ -0.14
EPHA3P29320 AC092552.1-201ENST00000547243 906 ntBASIC14.18□□□□□ -0.14
EPHA3P29320 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.18□□□□□ -0.14
EPHA3P29320 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.18□□□□□ -0.14
EPHA3P29320 AC099568.2-201ENST00000609194 695 ntBASIC14.18□□□□□ -0.14
EPHA3P29320 BX088702.1-201ENST00000610784 235 ntBASIC14.18□□□□□ -0.14
EPHA3P29320 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
EPHA3P29320 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EPHA3P29320 AL928654.5-201ENST00000624831 2501 ntBASIC14.18□□□□□ -0.14
EPHA3P29320 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EPHA3P29320 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms