Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 TUBB8P4-201ENST00000511806 1324 ntBASIC12.22□□□□□ -0.45
LMO1P25800 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.22□□□□□ -0.45
LMO1P25800 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.22□□□□□ -0.45
LMO1P25800 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 HOMER2P2-201ENST00000451621 847 ntBASIC12.22□□□□□ -0.45
LMO1P25800 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.22□□□□□ -0.45
LMO1P25800 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 AC008687.7-202ENST00000637404 953 ntBASIC12.22□□□□□ -0.45
LMO1P25800 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LMO1P25800 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.22□□□□□ -0.45
LMO1P25800 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.22□□□□□ -0.45
LMO1P25800 PDIA3P1-201ENST00000471856 1510 ntBASIC12.21□□□□□ -0.45
LMO1P25800 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.21□□□□□ -0.45
LMO1P25800 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO1P25800 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 CICP16-201ENST00000502609 2813 ntBASIC12.21□□□□□ -0.45
LMO1P25800 AC073548.1-201ENST00000624088 1882 ntBASIC12.21□□□□□ -0.45
LMO1P25800 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO1P25800 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO1P25800 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO1P25800 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.21□□□□□ -0.45
LMO1P25800 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.21□□□□□ -0.45
LMO1P25800 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
LMO1P25800 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO1P25800 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.21□□□□□ -0.45
LMO1P25800 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO1P25800 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
LMO1P25800 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.21□□□□□ -0.45
LMO1P25800 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.21□□□□□ -0.45
LMO1P25800 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.21□□□□□ -0.45
LMO1P25800 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.21□□□□□ -0.45
LMO1P25800 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.21□□□□□ -0.45
LMO1P25800 DUX4L46-201ENST00000566845 751 ntBASIC12.21□□□□□ -0.45
LMO1P25800 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.21□□□□□ -0.45
LMO1P25800 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO1P25800 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.21□□□□□ -0.45
LMO1P25800 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.21□□□□□ -0.45
LMO1P25800 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LMO1P25800 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.21□□□□□ -0.45
LMO1P25800 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO1P25800 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
LMO1P25800 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LMO1P25800 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
LMO1P25800 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO1P25800 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
LMO1P25800 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
LMO1P25800 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO1P25800 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
LMO1P25800 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO1P25800 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LMO1P25800 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LMO1P25800 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
LMO1P25800 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO1P25800 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms