Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.28■□□□□ 0.04
RARAP10276 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.28■□□□□ 0.04
RARAP10276 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.28■□□□□ 0.04
RARAP10276 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.28■□□□□ 0.04
RARAP10276 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.28■□□□□ 0.04
RARAP10276 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.28■□□□□ 0.04
RARAP10276 CHMP1AP1-201ENST00000445563 662 ntBASIC15.28■□□□□ 0.04
RARAP10276 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 CICP12-201ENST00000455801 843 ntBASIC15.28■□□□□ 0.04
RARAP10276 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RARAP10276 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RARAP10276 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.28■□□□□ 0.04
RARAP10276 ZACNP1-201ENST00000612259 710 ntBASIC15.28■□□□□ 0.04
RARAP10276 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.28■□□□□ 0.04
RARAP10276 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RARAP10276 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.28■□□□□ 0.04
RARAP10276 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RARAP10276 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.28■□□□□ 0.04
RARAP10276 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.28■□□□□ 0.04
RARAP10276 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RARAP10276 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.27■□□□□ 0.04
RARAP10276 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.27■□□□□ 0.04
RARAP10276 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RARAP10276 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.27■□□□□ 0.04
RARAP10276 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.27■□□□□ 0.04
RARAP10276 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
RARAP10276 AC005562.1-201ENST00000583030 3219 ntBASIC15.27■□□□□ 0.04
RARAP10276 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.27■□□□□ 0.04
RARAP10276 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.27■□□□□ 0.04
RARAP10276 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.27■□□□□ 0.04
RARAP10276 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RARAP10276 GAPDHP21-201ENST00000450301 1010 ntBASIC15.27■□□□□ 0.04
RARAP10276 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.27■□□□□ 0.04
RARAP10276 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.27■□□□□ 0.04
RARAP10276 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RARAP10276 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.27■□□□□ 0.04
RARAP10276 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.27■□□□□ 0.04
RARAP10276 AC106886.1-201ENST00000568660 600 ntBASIC15.27■□□□□ 0.04
RARAP10276 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.27■□□□□ 0.04
RARAP10276 PPY2P-201ENST00000582808 702 ntBASIC15.27■□□□□ 0.04
RARAP10276 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RARAP10276 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.27■□□□□ 0.04
RARAP10276 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RARAP10276 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.27■□□□□ 0.03
RARAP10276 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RARAP10276 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RARAP10276 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.27■□□□□ 0.03
RARAP10276 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RARAP10276 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RARAP10276 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.26■□□□□ 0.03
RARAP10276 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RARAP10276 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.26■□□□□ 0.03
RARAP10276 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms