Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SCARNA21-201ENST00000517026 139 ntBASIC11.25□□□□□ -0.61
TRBV12-3P01733 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 AL160314.3-201ENST00000556041 767 ntBASIC11.25□□□□□ -0.61
TRBV12-3P01733 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 AC009884.2-201ENST00000603110 324 ntBASIC11.25□□□□□ -0.61
TRBV12-3P01733 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 AC067750.1-201ENST00000608826 6545 ntBASIC11.25□□□□□ -0.61
TRBV12-3P01733 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
TRBV12-3P01733 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
TRBV12-3P01733 HSPA8P5-201ENST00000456928 2069 ntBASIC11.24□□□□□ -0.61
TRBV12-3P01733 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 AC144522.1-201ENST00000625111 1658 ntBASIC11.24□□□□□ -0.61
TRBV12-3P01733 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 AC104073.2-201ENST00000453737 312 ntBASIC11.24□□□□□ -0.61
TRBV12-3P01733 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 TUBB8P8-201ENST00000458717 1058 ntBASIC11.24□□□□□ -0.61
TRBV12-3P01733 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 AC006122.1-201ENST00000493323 440 ntBASIC11.24□□□□□ -0.61
TRBV12-3P01733 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 EID1-202ENST00000560490 584 ntTSL 3 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 BNIP3P13-201ENST00000599968 566 ntBASIC11.24□□□□□ -0.61
TRBV12-3P01733 AC243960.2-201ENST00000600996 747 ntBASIC11.24□□□□□ -0.61
TRBV12-3P01733 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 MIR6074-201ENST00000612054 107 ntBASIC11.24□□□□□ -0.61
TRBV12-3P01733 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 AL023803.2-201ENST00000620080 638 ntBASIC11.24□□□□□ -0.61
TRBV12-3P01733 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 GRN-222ENST00000639447 1314 ntTSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TRBV12-3P01733 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms