Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFBP01127 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFBP01127 AL136982.5-201ENST00000605222 294 ntBASIC14.36□□□□□ -0.11
PDGFBP01127 AC126755.5-201ENST00000622756 267 ntBASIC14.36□□□□□ -0.11
PDGFBP01127 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PDGFBP01127 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PDGFBP01127 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PDGFBP01127 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 AC015688.4-201ENST00000580780 1647 ntBASIC14.36□□□□□ -0.11
PDGFBP01127 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PDGFBP01127 LAP3P2-201ENST00000454686 1454 ntBASIC14.36□□□□□ -0.11
PDGFBP01127 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PDGFBP01127 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PDGFBP01127 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFBP01127 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFBP01127 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFBP01127 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFBP01127 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PDGFBP01127 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 AC068587.6-202ENST00000641839 5619 ntBASIC14.35□□□□□ -0.11
PDGFBP01127 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC14.35□□□□□ -0.11
PDGFBP01127 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 AL137244.1-201ENST00000422931 865 ntBASIC14.35□□□□□ -0.11
PDGFBP01127 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 TREX1-203ENST00000456089 629 ntTSL 3 BASIC14.35□□□□□ -0.11
PDGFBP01127 AC108724.1-201ENST00000481669 352 ntBASIC14.35□□□□□ -0.11
PDGFBP01127 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.35□□□□□ -0.11
PDGFBP01127 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC14.35□□□□□ -0.11
PDGFBP01127 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC14.35□□□□□ -0.11
PDGFBP01127 MIR4746-201ENST00000579802 71 ntBASIC14.35□□□□□ -0.11
PDGFBP01127 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC14.35□□□□□ -0.11
PDGFBP01127 ESR1-214ENST00000638569 132 ntTSL 5 BASIC14.35□□□□□ -0.11
PDGFBP01127 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDGFBP01127 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDGFBP01127 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDGFBP01127 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.35□□□□□ -0.11
PDGFBP01127 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDGFBP01127 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFBP01127 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFBP01127 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFBP01127 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.34□□□□□ -0.11
PDGFBP01127 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFBP01127 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.34□□□□□ -0.11
PDGFBP01127 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFBP01127 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFBP01127 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
PDGFBP01127 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFBP01127 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFBP01127 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFBP01127 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFBP01127 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PDGFBP01127 AL118508.1-201ENST00000613502 2345 ntBASIC14.34□□□□□ -0.11
PDGFBP01127 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFBP01127 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.34□□□□□ -0.11
PDGFBP01127 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PDGFBP01127 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDGFBP01127 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms