Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPHP4O75161 AC026691.1-201ENST00000602502 2017 ntBASIC19.76■□□□□ 0.75
NPHP4O75161 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPHP4O75161 AC103702.1-201ENST00000548801 2630 ntBASIC19.76■□□□□ 0.75
NPHP4O75161 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
NPHP4O75161 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPHP4O75161 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPHP4O75161 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPHP4O75161 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
NPHP4O75161 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC19.76■□□□□ 0.75
NPHP4O75161 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC19.76■□□□□ 0.75
NPHP4O75161 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC19.76■□□□□ 0.75
NPHP4O75161 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
NPHP4O75161 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.75■□□□□ 0.75
NPHP4O75161 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.75■□□□□ 0.75
NPHP4O75161 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 AL391005.1-201ENST00000623953 2435 ntBASIC19.75■□□□□ 0.75
NPHP4O75161 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
NPHP4O75161 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NPHP4O75161 SIGLEC20P-201ENST00000595243 1311 ntBASIC19.75■□□□□ 0.75
NPHP4O75161 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.75■□□□□ 0.75
NPHP4O75161 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC19.75■□□□□ 0.75
NPHP4O75161 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.75■□□□□ 0.75
NPHP4O75161 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 PES1P2-201ENST00000449745 1735 ntBASIC19.75■□□□□ 0.75
NPHP4O75161 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 RPSAP6-201ENST00000417882 882 ntBASIC19.75■□□□□ 0.75
NPHP4O75161 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC19.75■□□□□ 0.75
NPHP4O75161 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC19.75■□□□□ 0.75
NPHP4O75161 AC079250.1-201ENST00000456046 531 ntBASIC19.75■□□□□ 0.75
NPHP4O75161 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC19.75■□□□□ 0.75
NPHP4O75161 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC19.75■□□□□ 0.75
NPHP4O75161 MIR5091-201ENST00000578707 93 ntBASIC19.75■□□□□ 0.75
NPHP4O75161 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC19.75■□□□□ 0.75
NPHP4O75161 AP006248.1-201ENST00000610471 67 ntBASIC19.75■□□□□ 0.75
NPHP4O75161 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
NPHP4O75161 AC026120.2-201ENST00000617239 309 ntBASIC19.75■□□□□ 0.75
NPHP4O75161 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPHP4O75161 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.75■□□□□ 0.75
NPHP4O75161 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPHP4O75161 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPHP4O75161 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.74■□□□□ 0.75
NPHP4O75161 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
NPHP4O75161 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NPHP4O75161 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC19.74■□□□□ 0.75
NPHP4O75161 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.74■□□□□ 0.75
NPHP4O75161 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPHP4O75161 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPHP4O75161 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPHP4O75161 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC19.74■□□□□ 0.75
NPHP4O75161 AC215219.1-201ENST00000400706 1817 ntBASIC19.74■□□□□ 0.75
NPHP4O75161 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC19.74■□□□□ 0.75
NPHP4O75161 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NPHP4O75161 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPHP4O75161 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPHP4O75161 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPHP4O75161 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC19.74■□□□□ 0.75
NPHP4O75161 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC19.74■□□□□ 0.75
NPHP4O75161 AC015818.1-201ENST00000451011 244 ntBASIC19.74■□□□□ 0.75
NPHP4O75161 RNA5SP288-201ENST00000516075 93 ntBASIC19.74■□□□□ 0.75
NPHP4O75161 CD44-224ENST00000526669 870 ntTSL 5 BASIC19.74■□□□□ 0.75
NPHP4O75161 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NPHP4O75161 RPS5-205ENST00000598495 800 ntTSL 3 BASIC19.74■□□□□ 0.75
NPHP4O75161 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC19.74■□□□□ 0.75
NPHP4O75161 SNX20-205ENST00000610485 557 ntTSL 5 BASIC19.74■□□□□ 0.75
NPHP4O75161 AC138627.1-201ENST00000641127 1257 ntBASIC19.74■□□□□ 0.75
NPHP4O75161 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NPHP4O75161 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NPHP4O75161 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
NPHP4O75161 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPHP4O75161 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPHP4O75161 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 AC136621.1-201ENST00000624017 2304 ntBASIC19.73■□□□□ 0.75
NPHP4O75161 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.73■□□□□ 0.75
NPHP4O75161 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC19.73■□□□□ 0.75
NPHP4O75161 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
NPHP4O75161 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NPHP4O75161 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC19.73■□□□□ 0.75
NPHP4O75161 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NPHP4O75161 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPHP4O75161 AC026884.1-201ENST00000418296 457 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms