Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SCN2BO60939 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SCN2BO60939 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SCN2BO60939 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN2BO60939 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SCN2BO60939 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SCN2BO60939 C8orf49-201ENST00000525043 1968 ntBASIC13.8□□□□□ -0.2
SCN2BO60939 FAM90A12P-201ENST00000519497 2375 ntBASIC13.8□□□□□ -0.2
SCN2BO60939 FAM90A24P-201ENST00000520792 2369 ntBASIC13.8□□□□□ -0.2
SCN2BO60939 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.8□□□□□ -0.2
SCN2BO60939 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN2BO60939 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 CD8B2-202ENST00000417670 633 ntBASIC13.8□□□□□ -0.2
SCN2BO60939 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.8□□□□□ -0.2
SCN2BO60939 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 CICP12-201ENST00000455801 843 ntBASIC13.8□□□□□ -0.2
SCN2BO60939 AL590640.2-201ENST00000457038 527 ntBASIC13.8□□□□□ -0.2
SCN2BO60939 RN7SL837P-201ENST00000463010 287 ntBASIC13.8□□□□□ -0.2
SCN2BO60939 USP32P1-208ENST00000506594 1164 ntBASIC13.8□□□□□ -0.2
SCN2BO60939 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.8□□□□□ -0.2
SCN2BO60939 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN2BO60939 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.8□□□□□ -0.2
SCN2BO60939 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.8□□□□□ -0.2
SCN2BO60939 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.8□□□□□ -0.2
SCN2BO60939 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN2BO60939 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SCN2BO60939 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN2BO60939 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN2BO60939 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
SCN2BO60939 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 CICP17-201ENST00000418553 2377 ntBASIC13.79□□□□□ -0.2
SCN2BO60939 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.79□□□□□ -0.2
SCN2BO60939 FAM8A4P-201ENST00000435433 1213 ntBASIC13.79□□□□□ -0.2
SCN2BO60939 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.79□□□□□ -0.2
SCN2BO60939 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.79□□□□□ -0.2
SCN2BO60939 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.79□□□□□ -0.2
SCN2BO60939 AC005586.2-201ENST00000563946 837 ntBASIC13.79□□□□□ -0.2
SCN2BO60939 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SCN2BO60939 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.79□□□□□ -0.2
SCN2BO60939 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 OR10B1P-201ENST00000601666 907 ntBASIC13.79□□□□□ -0.2
SCN2BO60939 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SCN2BO60939 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN2BO60939 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.79□□□□□ -0.2
SCN2BO60939 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN2BO60939 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms