Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HCN1O60741 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HCN1O60741 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
HCN1O60741 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.69□□□□□ -0.22
HCN1O60741 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.69□□□□□ -0.22
HCN1O60741 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.69□□□□□ -0.22
HCN1O60741 HOMER2P2-201ENST00000451621 847 ntBASIC13.69□□□□□ -0.22
HCN1O60741 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 FAM86HP-204ENST00000513466 959 ntBASIC13.69□□□□□ -0.22
HCN1O60741 AC022447.6-201ENST00000515522 438 ntBASIC13.69□□□□□ -0.22
HCN1O60741 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.69□□□□□ -0.22
HCN1O60741 DUX4L47-201ENST00000566374 394 ntBASIC13.69□□□□□ -0.22
HCN1O60741 EEF1DP1-201ENST00000585891 896 ntBASIC13.69□□□□□ -0.22
HCN1O60741 AC091271.1-201ENST00000611877 1162 ntBASIC13.69□□□□□ -0.22
HCN1O60741 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.69□□□□□ -0.22
HCN1O60741 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.69□□□□□ -0.22
HCN1O60741 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.69□□□□□ -0.22
HCN1O60741 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HCN1O60741 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.69□□□□□ -0.22
HCN1O60741 AC023090.2-201ENST00000625182 2110 ntBASIC13.69□□□□□ -0.22
HCN1O60741 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.69□□□□□ -0.22
HCN1O60741 CICP8-201ENST00000455800 2813 ntBASIC13.68□□□□□ -0.22
HCN1O60741 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.68□□□□□ -0.22
HCN1O60741 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.68□□□□□ -0.22
HCN1O60741 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HCN1O60741 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 AC152010.1-201ENST00000415779 2006 ntBASIC13.68□□□□□ -0.22
HCN1O60741 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.68□□□□□ -0.22
HCN1O60741 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.68□□□□□ -0.22
HCN1O60741 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.68□□□□□ -0.22
HCN1O60741 BTBD6P1-201ENST00000412176 1267 ntBASIC13.68□□□□□ -0.22
HCN1O60741 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.68□□□□□ -0.22
HCN1O60741 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.68□□□□□ -0.22
HCN1O60741 AC022494.1-201ENST00000466044 728 ntBASIC13.68□□□□□ -0.22
HCN1O60741 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.68□□□□□ -0.22
HCN1O60741 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
HCN1O60741 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.68□□□□□ -0.22
HCN1O60741 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HCN1O60741 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.68□□□□□ -0.22
HCN1O60741 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HCN1O60741 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.68□□□□□ -0.22
HCN1O60741 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HCN1O60741 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 AC011474.4-201ENST00000623523 2076 ntBASIC13.68□□□□□ -0.22
HCN1O60741 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.68□□□□□ -0.22
HCN1O60741 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.68□□□□□ -0.22
HCN1O60741 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HCN1O60741 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.68□□□□□ -0.22
HCN1O60741 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HCN1O60741 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.67□□□□□ -0.22
HCN1O60741 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.67□□□□□ -0.22
HCN1O60741 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms