Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.97□□□□□ -0.65
SNAI2O43623 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.97□□□□□ -0.65
SNAI2O43623 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.97□□□□□ -0.65
SNAI2O43623 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 AL353779.1-201ENST00000434793 351 ntBASIC10.97□□□□□ -0.65
SNAI2O43623 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.97□□□□□ -0.65
SNAI2O43623 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.97□□□□□ -0.65
SNAI2O43623 KRT18P58-201ENST00000527480 1120 ntBASIC10.97□□□□□ -0.65
SNAI2O43623 AL512356.2-201ENST00000546955 174 ntBASIC10.97□□□□□ -0.65
SNAI2O43623 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.97□□□□□ -0.65
SNAI2O43623 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.97□□□□□ -0.65
SNAI2O43623 AC092364.2-202ENST00000597012 1073 ntBASIC10.97□□□□□ -0.65
SNAI2O43623 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.97□□□□□ -0.65
SNAI2O43623 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
SNAI2O43623 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 KRT8P14-201ENST00000414254 1442 ntBASIC10.97□□□□□ -0.65
SNAI2O43623 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 AC011840.2-201ENST00000563063 1520 ntBASIC10.97□□□□□ -0.65
SNAI2O43623 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 AL158070.2-201ENST00000623713 1621 ntBASIC10.97□□□□□ -0.65
SNAI2O43623 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
SNAI2O43623 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 FAM90A12P-201ENST00000519497 2375 ntBASIC10.97□□□□□ -0.65
SNAI2O43623 FAM90A24P-201ENST00000520792 2369 ntBASIC10.97□□□□□ -0.65
SNAI2O43623 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 VENTXP1-201ENST00000569334 2716 ntBASIC10.97□□□□□ -0.65
SNAI2O43623 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SNAI2O43623 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SNAI2O43623 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.96□□□□□ -0.65
SNAI2O43623 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.96□□□□□ -0.65
SNAI2O43623 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
SNAI2O43623 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.96□□□□□ -0.65
SNAI2O43623 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SNAI2O43623 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms