Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 MIR574-201ENST00000385209 96 ntBASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AC114501.2-201ENST00000439631 535 ntBASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 SORD2P-201ENST00000558556 1069 ntBASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AC036164.1-201ENST00000570544 333 ntBASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AC138761.1-201ENST00000584393 385 ntBASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AL391069.4-201ENST00000609583 481 ntBASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 LINC02486-201ENST00000604157 3000 ntBASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 BEND3P3-201ENST00000611030 2440 ntBASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV18A0A075B6X5 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CSPG4P11-201ENST00000560634 4910 ntBASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 AL139400.1-201ENST00000366220 510 ntBASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 ZNF890P-202ENST00000530367 1156 ntBASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 AL844908.2-201ENST00000609461 460 ntBASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV18A0A075B6X5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms