Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BIVM-ERCC5R4GMW8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
BIVM-ERCC5R4GMW8 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
BIVM-ERCC5R4GMW8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 HNRNPA1P56-201ENST00000505767 954 ntBASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 SRPK2P-201ENST00000523408 1100 ntBASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC011462.4-201ENST00000616866 449 ntBASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 FAM226B-201ENST00000602508 1490 ntBASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 MPV17-209ENST00000405983 859 ntTSL 5 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 EEF1DP5-201ENST00000431410 772 ntBASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC007279.1-201ENST00000448547 837 ntBASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 FBXO36P1-201ENST00000579006 471 ntBASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 AL390755.1-201ENST00000623716 2027 ntBASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 KRT18P33-201ENST00000398525 1043 ntBASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 RPL18AP16-201ENST00000424057 531 ntBASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC041040.1-201ENST00000425197 460 ntBASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 AL136084.1-201ENST00000449172 318 ntBASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 RNA5SP420-201ENST00000516997 137 ntBASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 RN7SL134P-201ENST00000579756 303 ntBASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC23.25■■□□□ 1.31
BIVM-ERCC5R4GMW8 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms