Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFT52Q9Y366 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFT52Q9Y366 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFT52Q9Y366 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IFT52Q9Y366 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFT52Q9Y366 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFT52Q9Y366 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IFT52Q9Y366 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
IFT52Q9Y366 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFT52Q9Y366 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 AC134312.5-201ENST00000568031 1313 ntBASIC13.71□□□□□ -0.21
IFT52Q9Y366 AC016397.2-201ENST00000624848 1985 ntBASIC13.71□□□□□ -0.21
IFT52Q9Y366 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 RN7SKP230-201ENST00000365642 335 ntBASIC13.71□□□□□ -0.21
IFT52Q9Y366 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 TERF1P3-201ENST00000505638 1227 ntBASIC13.71□□□□□ -0.21
IFT52Q9Y366 FTLP10-202ENST00000505798 471 ntBASIC13.71□□□□□ -0.21
IFT52Q9Y366 AC190387.1-201ENST00000551683 408 ntBASIC13.71□□□□□ -0.21
IFT52Q9Y366 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 BX088702.1-201ENST00000610784 235 ntBASIC13.71□□□□□ -0.21
IFT52Q9Y366 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.71□□□□□ -0.21
IFT52Q9Y366 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFT52Q9Y366 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFT52Q9Y366 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFT52Q9Y366 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFT52Q9Y366 BEND3P3-201ENST00000611030 2440 ntBASIC13.71□□□□□ -0.22
IFT52Q9Y366 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
IFT52Q9Y366 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
IFT52Q9Y366 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
IFT52Q9Y366 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFT52Q9Y366 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.71□□□□□ -0.22
IFT52Q9Y366 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFT52Q9Y366 RN7SL832P-201ENST00000607781 1756 ntBASIC13.71□□□□□ -0.22
IFT52Q9Y366 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFT52Q9Y366 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 CLUHP2-201ENST00000426660 1303 ntBASIC13.7□□□□□ -0.22
IFT52Q9Y366 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
IFT52Q9Y366 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFT52Q9Y366 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms