Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AL121949.3-201ENST00000406684 385 ntBASIC13.26□□□□□ -0.29
DKK4Q9UBT3 ACTBP14-201ENST00000411655 1089 ntBASIC13.26□□□□□ -0.29
DKK4Q9UBT3 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AL359092.2-201ENST00000423330 585 ntBASIC13.26□□□□□ -0.29
DKK4Q9UBT3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AC008494.1-201ENST00000497612 796 ntBASIC13.26□□□□□ -0.29
DKK4Q9UBT3 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 INO80E-209ENST00000567254 625 ntTSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AC007952.5-201ENST00000572818 1486 ntBASIC13.26□□□□□ -0.29
DKK4Q9UBT3 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 EEF1DP7-201ENST00000580496 513 ntBASIC13.26□□□□□ -0.29
DKK4Q9UBT3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 RN7SL524P-201ENST00000581152 300 ntBASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
DKK4Q9UBT3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 AC136604.1-202ENST00000425471 771 ntBASIC13.25□□□□□ -0.29
DKK4Q9UBT3 AP000533.1-201ENST00000456143 1177 ntBASIC13.25□□□□□ -0.29
DKK4Q9UBT3 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 BMF-206ENST00000558774 671 ntTSL 3 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 AC254633.1-201ENST00000606790 345 ntBASIC13.25□□□□□ -0.29
DKK4Q9UBT3 AC113385.2-201ENST00000614465 762 ntBASIC13.25□□□□□ -0.29
DKK4Q9UBT3 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 AL512324.3-201ENST00000619383 882 ntBASIC13.25□□□□□ -0.29
DKK4Q9UBT3 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 AC048382.6-201ENST00000621980 1223 ntBASIC13.25□□□□□ -0.29
DKK4Q9UBT3 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
DKK4Q9UBT3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms