Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 KRT8P24-201ENST00000560290 1559 ntBASIC17.47■□□□□ 0.39
RTN4Q9NQC3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 AC110048.1-201ENST00000604293 2157 ntBASIC17.47■□□□□ 0.39
RTN4Q9NQC3 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 MTCO1P8-201ENST00000416914 1523 ntBASIC17.47■□□□□ 0.39
RTN4Q9NQC3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 AC125807.2-201ENST00000513358 3514 ntBASIC17.46■□□□□ 0.39
RTN4Q9NQC3 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 MTCO1P46-201ENST00000451639 1491 ntBASIC17.46■□□□□ 0.39
RTN4Q9NQC3 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 CKMT2-AS1-201ENST00000500148 2224 ntTSL 2 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 FAM239C-201ENST00000381105 2118 ntTSL 5 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 AC002056.1-201ENST00000395613 760 ntBASIC17.46■□□□□ 0.39
RTN4Q9NQC3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 AL450487.1-201ENST00000426799 995 ntBASIC17.46■□□□□ 0.39
RTN4Q9NQC3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 TMEM198B-204ENST00000484016 896 ntBASIC17.46■□□□□ 0.39
RTN4Q9NQC3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 AC105233.2-201ENST00000523697 349 ntBASIC17.46■□□□□ 0.39
RTN4Q9NQC3 AF228730.5-201ENST00000530288 346 ntBASIC17.46■□□□□ 0.39
RTN4Q9NQC3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 PDPK2P-202ENST00000562415 1191 ntBASIC17.46■□□□□ 0.39
RTN4Q9NQC3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 AC104109.2-201ENST00000602919 1418 ntBASIC17.46■□□□□ 0.39
RTN4Q9NQC3 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.46■□□□□ 0.39
RTN4Q9NQC3 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RTN4Q9NQC3 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC17.46■□□□□ 0.38
RTN4Q9NQC3 PSMC1P12-201ENST00000436509 1314 ntBASIC17.46■□□□□ 0.38
RTN4Q9NQC3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.46■□□□□ 0.38
RTN4Q9NQC3 PRAMEF13-202ENST00000638454 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
RTN4Q9NQC3 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 ZNF565-201ENST00000304116 2023 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AC022762.2-201ENST00000600308 1353 ntBASIC17.45■□□□□ 0.38
RTN4Q9NQC3 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 INSL6-201ENST00000381641 758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AC004987.2-201ENST00000395959 1148 ntBASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AC006455.6-201ENST00000426192 893 ntBASIC17.45■□□□□ 0.38
RTN4Q9NQC3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 SNORA48.9-201ENST00000516419 162 ntBASIC17.45■□□□□ 0.38
RTN4Q9NQC3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AL662844.1-201ENST00000546340 181 ntBASIC17.45■□□□□ 0.38
RTN4Q9NQC3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AP000240.1-201ENST00000609910 452 ntBASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms